1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g071150

Solyc06g071150


Description : HIPL1-like protein (AHRD V3.3 *** A0A0B0MLG6_GOSAR)


Gene families : OG_42_0001948 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001948_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g071150
Cluster HCCA clusters: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
A4A49_14135 No alias hipl1 protein 0.03 Orthogroups_2024-Update
Sopen12g014550 No alias Glucose / Sorbosone dehydrogenase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
MF GO:0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor IEA InterProScan predictions
MF GO:0048038 quinone binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
InterPro domains Description Start Stop
IPR012938 Glc/Sorbosone_DH 194 508
No external refs found!