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  5. Solyc01g006810

Solyc01g006810


Description : RING/U-box superfamily protein (AHRD V3.3 --* AT5G15790.5)


Gene families : OG_42_0002510 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g006810
Cluster HCCA clusters: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g57500 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
Pp1s159_31V6 No alias zinc ring-type 0.02 Orthogroups_2024-Update
Sopen01g002790 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
InterPro domains Description Start Stop
IPR024766 Znf_RING_H2 46 70
No external refs found!