Kfl00213_0040 (kfl00213_0040_v1.1)

Aliases : kfl00213_0040_v1.1

Description : (p13192|psaf_horvu : 208.0) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Hordeum vulgare (Barley) & (at1g31330 : 203.0) Encodes subunit F of photosystem I.; photosystem I subunit F (PSAF); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre protein PsaF, subunit III (InterPro:IPR003666); Has 387 Blast hits to 387 proteins in 119 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 6; Other Eukaryotes - 163 (source: NCBI BLink). & (reliability: 406.0) & (original description: no original description)

Gene families : OG_42_0005007 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005007_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Klebsormidium release: Kfl00213_0040
Cluster	HCCA clusters: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
A4A49_36554	No alias	photosystem i reaction center subunit iii, chloroplastic	0.06	Orthogroups_2024-Update
At1g31330	No alias	Photosystem I reaction center subunit III, chloroplastic...	0.02	Orthogroups_2024-Update
Brara.G00547.1	No alias	component *(PsaF) of PS-I complex	0.06	Orthogroups_2024-Update
Brara.H00722.1	No alias	component *(PsaF) of PS-I complex	0.05	Orthogroups_2024-Update
Brara.I02744.1	No alias	component *(PsaF) of PS-I complex	0.05	Orthogroups_2024-Update
Cre09.g412100	No alias	photosystem I subunit F	0.05	Orthogroups_2024-Update
Glyma.05G022900	No alias	photosystem I subunit F	0.05	Orthogroups_2024-Update
HORVU5Hr1G100140.2	No alias	component *(PsaF) of PS-I complex	0.03	Orthogroups_2024-Update
MA_10090427g0010	No alias	(at1g31330 : 242.0) Encodes subunit F of photosystem I.;...	0.03	Orthogroups_2024-Update
Mp2g02960.1	No alias	component PsaF of PS-I complex	0.07	Orthogroups_2024-Update
PSME_00056206-RA	No alias	(at1g31330 : 247.0) Encodes subunit F of photosystem I.;...	0.05	Orthogroups_2024-Update
Pp1s121_54V6	No alias	photosystem i subunit iii	0.09	Orthogroups_2024-Update
Pp1s19_276V6	No alias	photosystem i subunit iii	0.07	Orthogroups_2024-Update
Pp1s345_25V6	No alias	photosystem i subunit iii	0.09	Orthogroups_2024-Update
Pp1s80_23V6	No alias	photosystem i subunit iii	0.04	Orthogroups_2024-Update
Seita.9G069300.1	No alias	component *(PsaF) of PS-I complex	0.07	Orthogroups_2024-Update
Sobic.001G070500.1	No alias	component *(PsaF) of PS-I complex	0.05	Orthogroups_2024-Update
Solyc02g069450	No alias	Photosystem I reaction center subunit III (AHRD V3.3 ***...	0.04	Orthogroups_2024-Update
Solyc02g069460	No alias	Photosystem I reaction center subunit III (AHRD V3.3 ***...	0.06	Orthogroups_2024-Update
Sopen02g018590	No alias	Photosystem I reaction centre subunit III	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009522	photosystem I	IEA	InterProScan predictions
CC	GO:0009538	photosystem I reaction center	IEA	InterProScan predictions
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity	IEP	Predicted GO
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	Predicted GO
MF	GO:0004834	tryptophan synthase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	Predicted GO
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predicted GO
BP	GO:0006568	tryptophan metabolic process	IEP	Predicted GO
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Predicted GO
BP	GO:0006586	indolalkylamine metabolic process	IEP	Predicted GO
BP	GO:0006720	isoprenoid metabolic process	IEP	Predicted GO
BP	GO:0006721	terpenoid metabolic process	IEP	Predicted GO
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0006790	sulfur compound metabolic process	IEP	Predicted GO
MF	GO:0008171	O-methyltransferase activity	IEP	Predicted GO
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Predicted GO
MF	GO:0008483	transaminase activity	IEP	Predicted GO
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Predicted GO
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Predicted GO
BP	GO:0009308	amine metabolic process	IEP	Predicted GO
BP	GO:0015994	chlorophyll metabolic process	IEP	Predicted GO
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Predicted GO
BP	GO:0016114	terpenoid biosynthetic process	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Predicted GO
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016836	hydro-lyase activity	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
BP	GO:0022607	cellular component assembly	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predicted GO
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predicted GO
BP	GO:0042430	indole-containing compound metabolic process	IEP	Predicted GO
BP	GO:0042440	pigment metabolic process	IEP	Predicted GO
BP	GO:0044106	cellular amine metabolic process	IEP	Predicted GO
BP	GO:0046148	pigment biosynthetic process	IEP	Predicted GO
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	Predicted GO
MF	GO:0046406	magnesium protoporphyrin IX methyltransferase activity	IEP	Predicted GO
MF	GO:0046429	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
BP	GO:0051186	cofactor metabolic process	IEP	Predicted GO
MF	GO:0052592	oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor	IEP	Predicted GO
BP	GO:0052646	alditol phosphate metabolic process	IEP	Predicted GO
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003666	PSI_PsaF	57	227

External Links

No external refs found!

Kfl00213_0040 (kfl00213_0040_v1.1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation