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- Kfl00215_0160
Kfl00215_0160 (kfl00215_0160_v1.1)
Aliases : kfl00215_0160_v1.1
Description : (q6vaf9|tba4_goshi : 828.0) Tubulin alpha-4 chain (Alpha-4 tubulin) - Gossypium hirsutum (Upland cotton) & (at1g50010 : 824.0) Encodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins.; tubulin alpha-2 chain (TUA2); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process, response to salt stress; LOCATED IN: tubulin complex, cytosol, cell wall, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-4 chain (TAIR:AT1G04820.1); Has 22626 Blast hits to 22529 proteins in 4679 species: Archae - 4; Bacteria - 25; Metazoa - 4391; Fungi - 13400; Plants - 1532; Viruses - 0; Other Eukaryotes - 3274 (source: NCBI BLink). & (reliability: 1648.0) & (original description: no original description)
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Klebsormidium release: Kfl00215_0160 | |
| Cluster | HCCA clusters: Cluster_55 | |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
| 232506 | No alias | tubulin alpha-2 chain | 0.03 | Orthogroups_2024-Update | |
| At1g50010 | No alias | Tubulin alpha-2 chain [Source:UniProtKB/Swiss-Prot;Acc:B9DGT7] | 0.02 | Orthogroups_2024-Update | |
| Bradi1g10150 | No alias | Tubulin/FtsZ family protein | 0.02 | Orthogroups_2024-Update | |
| Bradi1g23770 | No alias | tubulin alpha-5 | 0.03 | Orthogroups_2024-Update | |
| Brara.E01685.1 | No alias | alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer | 0.02 | Orthogroups_2024-Update | |
| Brara.J01613.1 | No alias | alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer | 0.02 | Orthogroups_2024-Update | |
| Cre03.g190950 | No alias | tubulin alpha-2 chain | 0.02 | Orthogroups_2024-Update | |
| Cre04.g216850 | No alias | tubulin alpha-2 chain | 0.02 | Orthogroups_2024-Update | |
| MA_93486g0010 | No alias | (at5g19780 : 800.0) Encodes an isoform of alpha tubulin.... | 0.02 | Orthogroups_2024-Update | |
| Mp1g24530.1 | No alias | component alpha-Tubulin of alpha-beta-Tubulin heterodimer | 0.04 | Orthogroups_2024-Update | |
| Mp2g23500.1 | No alias | component alpha-Tubulin of alpha-beta-Tubulin heterodimer | 0.03 | Orthogroups_2024-Update | |
| Mp4g00550.1 | No alias | component alpha-Tubulin of alpha-beta-Tubulin heterodimer | 0.02 | Orthogroups_2024-Update | |
| Solyc02g087880 | No alias | Tubulin alpha chain (AHRD V3.3 *** TBA_PRUDU) | 0.03 | Orthogroups_2024-Update | |
| Sopen02g032600 | No alias | Tubulin/FtsZ family, GTPase domain | 0.03 | Orthogroups_2024-Update | |
| evm.model.contig_448.6 | No alias | (q6vag0|tba2_goshi : 681.0) Tubulin alpha-2 chain... | 0.03 | Orthogroups_2024-Update | |
| evm.model.tig00000237.34 | No alias | (q9zrj4|tba_chlvu : 777.0) Tubulin alpha chain -... | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00000404.34 | No alias | (q9zrj4|tba_chlvu : 793.0) Tubulin alpha chain -... | 0.02 | Orthogroups_2024-Update | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003824 | catalytic activity | None | Extended |
| MF | GO:0003924 | GTPase activity | IEA | InterProScan predictions |
| MF | GO:0016462 | pyrophosphatase activity | None | Extended |
| MF | GO:0016787 | hydrolase activity | None | Extended |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | None | Extended |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | None | Extended |
| MF | GO:0017111 | nucleoside-triphosphatase activity | None | Extended |
| Type | GO Term | Name | Evidence | Source |
| CC | GO:0000776 | kinetochore | IEP | Predicted GO |
| MF | GO:0004645 | phosphorylase activity | IEP | Predicted GO |
| CC | GO:0005634 | nucleus | IEP | Predicted GO |
| CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
| BP | GO:0006270 | DNA replication initiation | IEP | Predicted GO |
| BP | GO:0006515 | protein quality control for misfolded or incompletely synthesized proteins | IEP | Predicted GO |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Predicted GO |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | Predicted GO |
| BP | GO:0030163 | protein catabolic process | IEP | Predicted GO |
| BP | GO:0031144 | proteasome localization | IEP | Predicted GO |
| CC | GO:0031262 | Ndc80 complex | IEP | Predicted GO |
| BP | GO:0031503 | protein-containing complex localization | IEP | Predicted GO |
| BP | GO:0034629 | cellular protein-containing complex localization | IEP | Predicted GO |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
| CC | GO:0043226 | organelle | IEP | Predicted GO |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
| BP | GO:0071630 | nuclear protein quality control by the ubiquitin-proteasome system | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
| IPR018316 | Tubulin/FtsZ_2-layer-sand-dom | 263 | 392 |
| IPR003008 | Tubulin_FtsZ_GTPase | 3 | 213 |
