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- Kfl00215_0220
Kfl00215_0220 (kfl00215_0220_v1.1)
Aliases : kfl00215_0220_v1.1
Description : (p04690|tbb_chlre : 826.0) Tubulin beta-1/beta-2 chain - Chlamydomonas reinhardtii & (at5g62700 : 813.0) encodes tubulin beta-2/beta-3 chain; tubulin beta chain 3 (TUB3); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: response to cold; LOCATED IN: tubulin complex, cell wall; EXPRESSED IN: cultured cell, seed; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 2 (TAIR:AT5G62690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1626.0) & (original description: no original description)
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Klebsormidium release: Kfl00215_0220 | |
| Cluster | HCCA clusters: Cluster_94 | |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
| 183654 | No alias | beta-6 tubulin | 0.03 | Orthogroups_2024-Update | |
| Bradi2g10970 | No alias | beta-6 tubulin | 0.02 | Orthogroups_2024-Update | |
| Bradi2g52790 | No alias | beta-6 tubulin | 0.02 | Orthogroups_2024-Update | |
| Brara.A02439.1 | No alias | beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer | 0.02 | Orthogroups_2024-Update | |
| Brara.B02782.1 | No alias | beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer | 0.02 | Orthogroups_2024-Update | |
| Brara.F01786.1 | No alias | beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G108766 | No alias | tubulin beta 8 | 0.02 | Orthogroups_2024-Update | |
| Glyma.03G124400 | No alias | beta-6 tubulin | 0.03 | Orthogroups_2024-Update | |
| Glyma.14G219300 | No alias | tubulin beta-1 chain | 0.02 | Orthogroups_2024-Update | |
| Glyma.15G132200 | No alias | tubulin beta 8 | 0.03 | Orthogroups_2024-Update | |
| Glyma.17G258300 | No alias | tubulin beta-1 chain | 0.02 | Orthogroups_2024-Update | |
| Glyma.19G127700 | No alias | beta-6 tubulin | 0.02 | Orthogroups_2024-Update | |
| HORVU3Hr1G078940.1 | No alias | beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer | 0.02 | Orthogroups_2024-Update | |
| LOC_Os01g59150 | No alias | tubulin/FtsZ domain containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| Mp1g20730.1 | No alias | component beta-Tubulin of alpha-beta-Tubulin heterodimer | 0.02 | Orthogroups_2024-Update | |
| PSME_00001574-RA | No alias | (q76fs3|tbb6_orysa : 424.0) Tubulin beta-6 chain (Beta-6... | 0.02 | Orthogroups_2024-Update | |
| Potri.009G067100 | No alias | beta-6 tubulin | 0.02 | Orthogroups_2024-Update | |
| Pp1s252_101V6 | No alias | tubulin beta | 0.02 | Orthogroups_2024-Update | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003824 | catalytic activity | None | Extended |
| MF | GO:0003924 | GTPase activity | IEA | InterProScan predictions |
| MF | GO:0016462 | pyrophosphatase activity | None | Extended |
| MF | GO:0016787 | hydrolase activity | None | Extended |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | None | Extended |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | None | Extended |
| MF | GO:0017111 | nucleoside-triphosphatase activity | None | Extended |
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
| MF | GO:0004814 | arginine-tRNA ligase activity | IEP | Predicted GO |
| MF | GO:0005507 | copper ion binding | IEP | Predicted GO |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Predicted GO |
| BP | GO:0006414 | translational elongation | IEP | Predicted GO |
| BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | Predicted GO |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | Predicted GO |
| MF | GO:0008144 | drug binding | IEP | Predicted GO |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Predicted GO |
| MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
| BP | GO:0018196 | peptidyl-asparagine modification | IEP | Predicted GO |
| BP | GO:0018279 | protein N-linked glycosylation via asparagine | IEP | Predicted GO |
| MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
| MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043168 | anion binding | IEP | Predicted GO |
| CC | GO:0044432 | endoplasmic reticulum part | IEP | Predicted GO |
| MF | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | IEP | Predicted GO |
| BP | GO:0055085 | transmembrane transport | IEP | Predicted GO |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
| IPR018316 | Tubulin/FtsZ_2-layer-sand-dom | 261 | 382 |
| IPR003008 | Tubulin_FtsZ_GTPase | 3 | 211 |
