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Aliases : kfl00231_0100_v1.1
Description : (at5g55390 : 398.0) Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression.; ENHANCED DOWNY MILDEW 2 (EDM2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: EDM2-like protein1 (TAIR:AT5G48090.1). & (reliability: 796.0) & (original description: no original description)
Gene families : OG_42_0001025 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001025_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Klebsormidium release: Kfl00231_0100 | |
| Cluster | HCCA clusters: Cluster_106 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Predicted GO |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predicted GO |
| MF | GO:0003909 | DNA ligase activity | IEP | Predicted GO |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Predicted GO |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Predicted GO |
| CC | GO:0005694 | chromosome | IEP | Predicted GO |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
| BP | GO:0006401 | RNA catabolic process | IEP | Predicted GO |
| BP | GO:0006402 | mRNA catabolic process | IEP | Predicted GO |
| BP | GO:0007155 | cell adhesion | IEP | Predicted GO |
| BP | GO:0007160 | cell-matrix adhesion | IEP | Predicted GO |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Predicted GO |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0022610 | biological adhesion | IEP | Predicted GO |
| BP | GO:0031589 | cell-substrate adhesion | IEP | Predicted GO |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011124 | Znf_CW | 740 | 784 |
| No external refs found! |