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  5. Kfl00235_0090

Kfl00235_0090 (kfl00235_0090_v1.1)


Aliases : kfl00235_0090_v1.1

Description : (at2g20280 : 335.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 6263 Blast hits to 4194 proteins in 354 species: Archae - 14; Bacteria - 176; Metazoa - 2274; Fungi - 740; Plants - 301; Viruses - 209; Other Eukaryotes - 2549 (source: NCBI BLink). & (reliability: 670.0) & (original description: no original description)


Gene families : OG_42_0004616 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004616_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00235_0090
Cluster HCCA clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
80672 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 Orthogroups_2024-Update
MA_10434309g0010 No alias (at2g20280 : 420.0) Zinc finger C-x8-C-x5-C-x3-H type... 0.01 Orthogroups_2024-Update
Potri.006G132800 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.04 Orthogroups_2024-Update
Potri.008G045600 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR032378 ZC3H15/TMA46_C 230 311
No external refs found!