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Aliases : kfl00238_0160_v1.1
Description : (at5g10490 : 218.0) A member of MscS-like gene family, structurally very similar to MSL3, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL2-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE.; MSCS-like 2 (MSL2); CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Mechanosensitive ion channel MscS (InterPro:IPR006685); BEST Arabidopsis thaliana protein match is: MSCS-like 3 (TAIR:AT1G58200.2). & (reliability: 436.0) & (original description: no original description)
Gene families : OG_42_0000878 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000878_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Klebsormidium release: Kfl00238_0160 | |
| Cluster | HCCA clusters: Cluster_90 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi1g32757 | No alias | MSCS-like 2 | 0.02 | Orthogroups_2024-Update | |
| Brara.J02304.1 | No alias | mechanosensitive ion channel *(MSL) | 0.02 | Orthogroups_2024-Update | |
| Glyma.01G023200 | No alias | MSCS-like 2 | 0.02 | Orthogroups_2024-Update | |
| Glyma.09G199100 | No alias | MSCS-like 2 | 0.01 | Orthogroups_2024-Update | |
| Pp1s28_223V6 | No alias | MscS-Like mechanosensitive ion channel MSCL8 | 0.01 | Orthogroups_2024-Update | |
| Sopen04g030100 | No alias | Mechanosensitive ion channel | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | InterProScan predictions |
| BP | GO:0055085 | transmembrane transport | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predicted GO |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Predicted GO |
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
| MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Predicted GO |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0009056 | catabolic process | IEP | Predicted GO |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Predicted GO |
| MF | GO:0016160 | amylase activity | IEP | Predicted GO |
| MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
| MF | GO:0016301 | kinase activity | IEP | Predicted GO |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predicted GO |
| BP | GO:0017038 | protein import | IEP | Predicted GO |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
| BP | GO:1901575 | organic substance catabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006685 | MscS_channel | 280 | 485 |
| No external refs found! |