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  5. Kfl00255_0190

Kfl00255_0190 (kfl00255_0190_v1.1,...)


Aliases : kfl00255_0190_v1.1, kfl00255_0190_v1.1

Description : (at1g01060 : 122.0) LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1; LATE ELONGATED HYPOCOTYL (LHY); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 11 processes; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: circadian clock associated 1 (TAIR:AT2G46830.1). & (reliability: 244.0) & (original description: no original description)


Gene families : OG_42_0000380 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00255_0190
Cluster HCCA clusters: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
A4A49_11843 No alias protein reveille 6 0.02 Orthogroups_2024-Update
At4g01280 No alias Protein REVEILLE 5 [Source:UniProtKB/Swiss-Prot;Acc:C0SVG5] 0.02 Orthogroups_2024-Update
At5g02840 No alias LCL1 [Source:UniProtKB/TrEMBL;Acc:A0A178U8Z5] 0.01 Orthogroups_2024-Update
At5g17300 No alias Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6] 0.02 Orthogroups_2024-Update
Bradi1g34842 No alias Homeodomain-like superfamily protein 0.01 Orthogroups_2024-Update
Brara.A03523.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.02 Orthogroups_2024-Update
Brara.C00086.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.02 Orthogroups_2024-Update
Brara.E03078.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.02 Orthogroups_2024-Update
Brara.J02851.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.02 Orthogroups_2024-Update
GRMZM2G029850 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G118693 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G145041 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G170322 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G001830.3 No alias circadian clock factor *(REVEILLE) & transcription... 0.02 Orthogroups_2024-Update
HORVU7Hr1G121210.4 No alias transcription factor *(REVEILLE) 0.02 Orthogroups_2024-Update
LOC_Os02g46030 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g49450 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g01670 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_115536g0010 No alias (at1g01060 : 122.0) LHY encodes a myb-related putative... 0.01 Orthogroups_2024-Update
Sobic.010G004300.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.02 Orthogroups_2024-Update
Solyc03g098320 No alias Myb transcription factor (AHRD V3.3 *** A0A072UBN0_MEDTR) 0.02 Orthogroups_2024-Update
Solyc10g084370 No alias MYB transcription factor (AHRD V3.3 *** B5TV64_CAMSI) 0.02 Orthogroups_2024-Update
evm.model.contig_2186.6 No alias (at5g37260 : 87.8) Encodes a MYB family transcription... 0.02 Orthogroups_2024-Update
evm.model.contig_3444.2 No alias (at5g52660 : 118.0) Homeodomain-like superfamily... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004555 alpha,alpha-trehalase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0015927 trehalase activity IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 121 164
No external refs found!