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  5. Kfl00273_0040

Kfl00273_0040 (kfl00273_0040_v1.1)


Aliases : kfl00273_0040_v1.1

Description : (at1g02270 : 330.0) Calcium-binding endonuclease/exonuclease/phosphatase family; FUNCTIONS IN: catalytic activity, calcium ion binding; INVOLVED IN: response to cold; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Calcium-binding endonuclease/exonuclease/phosphatase family (TAIR:AT5G54130.2); Has 514 Blast hits to 514 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 59; Plants - 214; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 660.0) & (original description: no original description)


Gene families : OG_42_0004475 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004475_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Klebsormidium release: Kfl00273_0040
Cluster HCCA clusters: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Potri.002G182500 No alias Calcium-binding endonuclease/exonuclease/phosphatase family 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 167 384
IPR002048 EF_hand_dom 463 518
No external refs found!