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  5. Solyc06g072960

Solyc06g072960


No description available


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g072960
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Brara.D02299.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Brara.F03152.1 No alias subfamily ABCB transporter 0.05 Orthogroups_2024-Update
Brara.I01939.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Glyma.14G220200 No alias P-glycoprotein 13 0.04 Orthogroups_2024-Update
PSME_00006519-RA No alias (at3g28345 : 1327.0) ABC transporter family protein;... 0.02 Orthogroups_2024-Update
PSME_00023484-RA No alias (at2g36910 : 1766.0) Belongs to the family of... 0.06 Orthogroups_2024-Update
PSME_00037881-RA No alias (at2g36910 : 494.0) Belongs to the family of ATP-binding... 0.03 Orthogroups_2024-Update
PSME_00039058-RA No alias (q6yuu5|mdr_orysa : 1225.0) Putative multidrug... 0.03 Orthogroups_2024-Update
Potri.014G113500 No alias P-glycoprotein 21 0.03 Orthogroups_2024-Update
Potri.017G085000 No alias ABC transporter family protein 0.04 Orthogroups_2024-Update
Seita.1G145300.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Seita.6G060200.1 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
Seita.6G060300.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Seita.7G029100.1 No alias ABC-B-type transporter *(AMN3) & subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sobic.003G267700.1 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
Sobic.007G042600.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Sopen06g004030 No alias ABC transporter transmembrane region 0.02 Orthogroups_2024-Update
evm.model.contig_618.5 No alias (at2g47000 : 919.0) Multidrug resistance P-glycoprotein... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009539 photosystem II reaction center IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!