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  5. Kfl00286_0070

Kfl00286_0070 (kfl00286_0070_v1.1)


Aliases : kfl00286_0070_v1.1

Description : (p49730|rir2_tobac : 528.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (at3g27060 : 518.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development.; TSO MEANING 'UGLY' IN CHINESE 2 (TSO2); FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, ribonucleoside-diphosphate reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: ribonucleotide reductase 2A (TAIR:AT3G23580.1); Has 9355 Blast hits to 9350 proteins in 2299 species: Archae - 34; Bacteria - 4270; Metazoa - 263; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3634 (source: NCBI BLink). & (reliability: 1036.0) & (original description: no original description)


Gene families : OG_42_0002879 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002879_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00286_0070
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Brara.F03232.1 No alias small subunit of ribonucleoside-diphosphate reductase heterodimer 0.02 Orthogroups_2024-Update
Cre12.g491050 No alias ribonucleotide reductase 2A 0.06 Orthogroups_2024-Update
Glyma.16G056300 No alias Ferritin/ribonucleotide reductase-like family protein 0.04 Orthogroups_2024-Update
Glyma.19G091400 No alias Ferritin/ribonucleotide reductase-like family protein 0.03 Orthogroups_2024-Update
MA_10430569g0010 No alias (p49730|rir2_tobac : 535.0) Ribonucleoside-diphosphate... 0.04 Orthogroups_2024-Update
MA_1482g0010 No alias (p49730|rir2_tobac : 556.0) Ribonucleoside-diphosphate... 0.04 Orthogroups_2024-Update
PSME_00008638-RA No alias (p49730|rir2_tobac : 548.0) Ribonucleoside-diphosphate... 0.03 Orthogroups_2024-Update
PSME_00032081-RA No alias (p49730|rir2_tobac : 546.0) Ribonucleoside-diphosphate... 0.02 Orthogroups_2024-Update
PSME_00033506-RA No alias (p49730|rir2_tobac : 528.0) Ribonucleoside-diphosphate... 0.02 Orthogroups_2024-Update
Solyc02g094160 No alias Ribonucleoside-diphosphate reductase small chain (AHRD... 0.03 Orthogroups_2024-Update
Sopen02g038790 No alias Ribonucleotide reductase, small chain 0.03 Orthogroups_2024-Update
evm.model.contig_2048.10 No alias (at3g23580 : 461.0) Encodes one of the 3 ribonucleotide... 0.01 Orthogroups_2024-Update
evm.model.tig00000383.42 No alias (at3g27060 : 431.0) Encodes one of the 3 ribonucleotide... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006275 regulation of DNA replication IEP Predicted GO
BP GO:0006333 chromatin assembly or disassembly IEP Predicted GO
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0031144 proteasome localization IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0031503 protein-containing complex localization IEP Predicted GO
BP GO:0034629 cellular protein-containing complex localization IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0071630 nuclear protein quality control by the ubiquitin-proteasome system IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000358 RNR_small_fam 36 302
No external refs found!