1. Home
  2. Species
  3. Klebsormidium nitens
  4. Sequence
  5. Kfl00300_0030

Kfl00300_0030 (kfl00300_0030_v1.1)


Aliases : kfl00300_0030_v1.1

Description : no hits & (original description: no original description)


Gene families : OG_42_0001839 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001839_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00300_0030
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
A4A49_64689 No alias histone deacetylase hdt1 0.02 Orthogroups_2024-Update
At2g27840 No alias Histone deacetylase HDT4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M4T3] 0.03 Orthogroups_2024-Update
Bradi2g14120 No alias histone deacetylase 2B 0.01 Orthogroups_2024-Update
Brara.B00987.1 No alias HD2-type histone deacetylase *(HD2/HDT) 0.02 Orthogroups_2024-Update
Brara.C01007.1 No alias HD2-type histone deacetylase *(HD2/HDT) 0.02 Orthogroups_2024-Update
Brara.D01665.1 No alias HD2-type histone deacetylase *(HD2/HDT) 0.03 Orthogroups_2024-Update
Brara.J02801.1 No alias HD2-type histone deacetylase *(HD2/HDT) 0.02 Orthogroups_2024-Update
Cre12.g551050 No alias Function unknown 0.02 Orthogroups_2024-Update
GRMZM2G100146 No alias histone deacetylase 3 0.02 Orthogroups_2024-Update
GRMZM2G159032 No alias histone deacetylase 3 0.02 Orthogroups_2024-Update
Glyma.12G181400 No alias histone deacetylase 2C 0.04 Orthogroups_2024-Update
Glyma.13G319500 No alias histone deacetylase 2C 0.02 Orthogroups_2024-Update
LOC_Os05g51830 No alias ZOS5-12 - C2H2 zinc finger protein, expressed 0.01 Orthogroups_2024-Update
Mp5g10240.1 No alias histone deacetylase (HDT/HD2) 0.01 Orthogroups_2024-Update
Pp1s7_389V6 No alias histone deacetylase 0.05 Orthogroups_2024-Update
Seita.3G117500.1 No alias HD2-type histone deacetylase *(HD2/HDT) 0.06 Orthogroups_2024-Update
Seita.5G422200.1 No alias HD2-type histone deacetylase *(HD2/HDT) 0.04 Orthogroups_2024-Update
Sobic.003G396600.1 No alias HD2-type histone deacetylase *(HD2/HDT) 0.02 Orthogroups_2024-Update
Sobic.009G211700.1 No alias HD2-type histone deacetylase *(HD2/HDT) 0.03 Orthogroups_2024-Update
Solyc09g009030 No alias Histone deacetylase HDT1 (AHRD V3.3 *** HDT1_SOLCH) 0.04 Orthogroups_2024-Update
Solyc11g066840 No alias Histone deacetylase-like protein-like (AHRD V3.3 ***... 0.01 Orthogroups_2024-Update
evm.model.tig00000388.65 No alias (at4g25340 : 88.6) Encodes a member of the FKBP-type... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!