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  5. Solyc06g073430

Solyc06g073430


Description : Ribosomal protein S3 (AHRD V3.3 --* A0A0K1ZDA3_9SOLA)


Gene families : OG_42_0002354 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002354_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g073430
Cluster HCCA clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
171412 No alias Ribosomal protein S14p/S29e family protein 0.07 Orthogroups_2024-Update
At3g44010 No alias Ribosomal protein S14p/S29e family protein... 0.09 Orthogroups_2024-Update
Brara.A00423.1 No alias component *(uS14) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Brara.H01243.1 No alias component *(uS14) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Cre08.g358556 No alias Ribosomal protein S14p/S29e family protein 0.11 Orthogroups_2024-Update
HORVU4Hr1G037800.1 No alias component *(uS14) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
MA_336247g0010 No alias (at4g33865 : 112.0) Ribosomal protein S14p/S29e family... 0.04 Orthogroups_2024-Update
Mp5g15120.1 No alias component RPS29 of SSU proteome 0.02 Orthogroups_2024-Update
Mp8g03910.1 No alias component RPS29 of SSU proteome 0.03 Orthogroups_2024-Update
PSME_00033957-RA No alias (at4g33865 : 112.0) Ribosomal protein S14p/S29e family... 0.08 Orthogroups_2024-Update
PSME_00037160-RA No alias (at4g33865 : 113.0) Ribosomal protein S14p/S29e family... 0.07 Orthogroups_2024-Update
Potri.009G090000 No alias Ribosomal protein S14p/S29e family protein 0.08 Orthogroups_2024-Update
Pp1s58_94V6 No alias 40s ribosomal protein s29 0.17 Orthogroups_2024-Update
Pp1s79_7V6 No alias 40s ribosomal protein s29 0.15 Orthogroups_2024-Update
Pp1s7_453V6 No alias 40s ribosomal protein s29 0.03 Orthogroups_2024-Update
Seita.9G073900.1 No alias component *(uS14) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Sobic.008G108601.1 No alias component *(uS14) of small ribosomal-subunit (SSU) proteome 0.14 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!