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  5. Kfl00333_0050

Kfl00333_0050 (kfl00333_0050_v1.1)


Aliases : kfl00333_0050_v1.1

Description : (at3g05760 : 169.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, double-stranded RNA binding (InterPro:IPR022755). & (reliability: 338.0) & (original description: no original description)


Gene families : OG_42_0005816 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005816_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Klebsormidium release: Kfl00333_0050
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Bradi1g02950 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
Cre07.g341650 No alias C2H2 and C2HC zinc fingers superfamily protein 0.01 Orthogroups_2024-Update
MA_13077g0010 No alias (at3g05760 : 166.0) C2H2 and C2HC zinc fingers... 0.02 Orthogroups_2024-Update
evm.model.contig_3401.4 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 87 112
No external refs found!