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  5. Kfl00342_0140

Kfl00342_0140 (kfl00342_0140_v1.1)


Aliases : kfl00342_0140_v1.1

Description : (at4g11960 : 323.0) Encodes PGRL1B, a transmembrane protein present in thylakoids. PGRL1B has a highly homologous isoform PGRL1A encoded by At4g22890. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I).; PGR5-like B (PGRL1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I, photosynthesis; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-LIKE A (TAIR:AT4G22890.4). & (reliability: 646.0) & (original description: no original description)


Gene families : OG_42_0003669 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003669_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Klebsormidium release: Kfl00342_0140
Cluster HCCA clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
A4A49_21929 No alias pgr5-like protein 1a, chloroplastic 0.02 Orthogroups_2024-Update
Bradi1g52550 No alias PGR5-LIKE A 0.03 Orthogroups_2024-Update
Brara.C04640.1 No alias component *(PGRL1) of cyclic electron flow PGR5-PGRL1 complex 0.02 Orthogroups_2024-Update
Cre07.g340200 No alias PGR5-like B 0.01 Orthogroups_2024-Update
Potri.003G119200 No alias PGR5-LIKE A 0.01 Orthogroups_2024-Update
Pp1s145_159V6 No alias pgr5-like a 0.04 Orthogroups_2024-Update
Seita.9G004200.1 No alias component *(PGRL1) of cyclic electron flow PGR5-PGRL1 complex 0.01 Orthogroups_2024-Update
Solyc08g007770 No alias Expansin-like protein (AHRD V3.3 *-* Q0WT83_ARATH) 0.02 Orthogroups_2024-Update
Solyc08g080050 No alias PGRL1A transmembrane protein (AHRD V3.3 *** A0A0F7GZP2_9ROSI) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008252 nucleotidase activity IEP Predicted GO
MF GO:0008253 5'-nucleotidase activity IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009264 deoxyribonucleotide catabolic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
CC GO:0019008 molybdopterin synthase complex IEP Predicted GO
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!