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  5. Kfl00347_0040

Kfl00347_0040 (kfl00347_0040_v1.1)


Aliases : kfl00347_0040_v1.1

Description : (at4g39200 : 89.0) Ribosomal protein S25 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S25 (InterPro:IPR004977); BEST Arabidopsis thaliana protein match is: Ribosomal protein S25 family protein (TAIR:AT2G21580.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 178.0) & (original description: no original description)


Gene families : OG_42_0001610 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001610_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00347_0040
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
172404 No alias Ribosomal protein S25 family protein 0.03 Orthogroups_2024-Update
Bradi3g42900 No alias Ribosomal protein S25 family protein 0.05 Orthogroups_2024-Update
Bradi4g38580 No alias Ribosomal protein S25 family protein 0.02 Orthogroups_2024-Update
Brara.A00031.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Brara.C04140.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Brara.D01272.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Brara.F03876.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Brara.H01813.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Brara.I04632.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Cre08.g382500 No alias Ribosomal protein S25 family protein 0.04 Orthogroups_2024-Update
GRMZM2G084868 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.04G011100 No alias Ribosomal protein S25 family protein 0.06 Orthogroups_2024-Update
Glyma.11G115400 No alias Ribosomal protein S25 family protein 0.05 Orthogroups_2024-Update
Glyma.12G041300 No alias Ribosomal protein S25 family protein 0.02 Orthogroups_2024-Update
HORVU4Hr1G001220.3 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
LOC_Os09g39540 No alias 40S ribosomal protein S25, putative, expressed 0.03 Orthogroups_2024-Update
Mp4g06120.1 No alias component RPS25 of SSU proteome 0.02 Orthogroups_2024-Update
PSME_00018601-RA No alias (at2g21580 : 128.0) Ribosomal protein S25 family... 0.04 Orthogroups_2024-Update
Potri.004G157200 No alias Ribosomal protein S25 family protein 0.09 Orthogroups_2024-Update
Pp1s21_4V6 No alias 40s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s26_213V6 No alias 40s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s30_212V6 No alias 40s ribosomal protein 0.02 Orthogroups_2024-Update
Pp1s36_84V6 No alias 40s ribosomal protein 0.02 Orthogroups_2024-Update
Seita.2G134200.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Seita.6G248800.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Sobic.003G322400.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Sobic.003G322532.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sobic.003G338966.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Solyc02g069850 No alias ribosomal protein S25 0.09 Orthogroups_2024-Update
Sopen01g012450 No alias S25 ribosomal protein 0.07 Orthogroups_2024-Update
Sopen02g019010 No alias S25 ribosomal protein 0.07 Orthogroups_2024-Update
Sopen06g020450 No alias S25 ribosomal protein 0.07 Orthogroups_2024-Update
Sopen10g017830 No alias S25 ribosomal protein 0.07 Orthogroups_2024-Update
Sopen10g023380 No alias S25 ribosomal protein 0.06 Orthogroups_2024-Update
evm.model.contig_2033.4 No alias (at4g34555 : 106.0) Ribosomal protein S25 family... 0.07 Orthogroups_2024-Update
evm.model.tig00000037.5 No alias (at4g39200 : 85.1) Ribosomal protein S25 family protein;... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004977 Ribosomal_S25 7 104
No external refs found!