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  5. Kfl00352_0050

Kfl00352_0050 (kfl00352_0050_v1.1)


Aliases : kfl00352_0050_v1.1

Description : (at2g27710 : 100.0) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to cold; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27720.1). & (o24415|rla2b_maize : 97.4) 60S acidic ribosomal protein P2B - Zea mays (Maize) & (reliability: 200.0) & (original description: no original description)


Gene families : OG_42_0001058 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00352_0050
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
139397 No alias 60S acidic ribosomal protein family 0.04 Orthogroups_2024-Update
At2g27720 No alias 60S acidic ribosomal protein family... 0.02 Orthogroups_2024-Update
Bradi5g09212 No alias 60S acidic ribosomal protein family 0.02 Orthogroups_2024-Update
Bradi5g09217 No alias 60S acidic ribosomal protein family 0.03 Orthogroups_2024-Update
Brara.D01652.1 No alias component *(RPP2) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Cre02.g143050 No alias 60S acidic ribosomal protein family 0.04 Orthogroups_2024-Update
Glyma.10G067800 No alias 60S acidic ribosomal protein family 0.02 Orthogroups_2024-Update
Glyma.12G182800 No alias 60S acidic ribosomal protein family 0.02 Orthogroups_2024-Update
Glyma.U031221 No alias 60S acidic ribosomal protein family 0.03 Orthogroups_2024-Update
LOC_Os01g09510 No alias 60S acidic ribosomal protein, putative, expressed 0.01 Orthogroups_2024-Update
Mp1g06260.1 No alias component RPP2 of LSU proteome component 0.02 Orthogroups_2024-Update
Mp1g08160.1 No alias component RPP2 of LSU proteome component 0.02 Orthogroups_2024-Update
Potri.004G185800 No alias 60S acidic ribosomal protein family 0.04 Orthogroups_2024-Update
Potri.009G146200 No alias 60S acidic ribosomal protein family 0.02 Orthogroups_2024-Update
Pp1s14_289V6 No alias 60s acidic ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s21_165V6 No alias 60s acidic ribosomal protein 0.04 Orthogroups_2024-Update
Pp1s30_261V6 No alias 60s acidic ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s51_319V6 No alias 60s acidic ribosomal protein 0.05 Orthogroups_2024-Update
Solyc11g067100 No alias 60s acidic ribosomal family protein (AHRD V3.3 *** A9PCM7_POPTR) 0.04 Orthogroups_2024-Update
Sopen01g004990 No alias 60s Acidic ribosomal protein 0.03 Orthogroups_2024-Update
evm.model.contig_2346.3 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
evm.model.contig_3407.5 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
evm.model.tig00020830.75 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!