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Aliases : kfl00353_0095_v1.1
Description : (at5g55390 : 115.0) Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression.; ENHANCED DOWNY MILDEW 2 (EDM2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: EDM2-like protein1 (TAIR:AT5G48090.1). & (reliability: 230.0) & (original description: no original description)
Gene families : OG_42_0001025 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001025_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Klebsormidium release: Kfl00353_0095 | |
| Cluster | HCCA clusters: Cluster_66 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi3g22461 | No alias | ENHANCED DOWNY MILDEW 2 | 0.02 | Orthogroups_2024-Update | |
| Mp2g00350.1 | No alias | chromatin-associated epigenetic factor | 0.01 | Orthogroups_2024-Update | |
| Potri.001G359900 | No alias | ENHANCED DOWNY MILDEW 2 | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
| MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
| CC | GO:0005672 | transcription factor TFIIA complex | IEP | Predicted GO |
| CC | GO:0005681 | spliceosomal complex | IEP | Predicted GO |
| CC | GO:0005739 | mitochondrion | IEP | Predicted GO |
| BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Predicted GO |
| BP | GO:0006414 | translational elongation | IEP | Predicted GO |
| BP | GO:0006996 | organelle organization | IEP | Predicted GO |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Predicted GO |
| BP | GO:0010639 | negative regulation of organelle organization | IEP | Predicted GO |
| BP | GO:0010824 | regulation of centrosome duplication | IEP | Predicted GO |
| BP | GO:0010826 | negative regulation of centrosome duplication | IEP | Predicted GO |
| BP | GO:0010948 | negative regulation of cell cycle process | IEP | Predicted GO |
| BP | GO:0016073 | snRNA metabolic process | IEP | Predicted GO |
| BP | GO:0016180 | snRNA processing | IEP | Predicted GO |
| BP | GO:0016458 | gene silencing | IEP | Predicted GO |
| MF | GO:0016854 | racemase and epimerase activity | IEP | Predicted GO |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Predicted GO |
| BP | GO:0030030 | cell projection organization | IEP | Predicted GO |
| BP | GO:0030031 | cell projection assembly | IEP | Predicted GO |
| BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
| CC | GO:0031082 | BLOC complex | IEP | Predicted GO |
| CC | GO:0031083 | BLOC-1 complex | IEP | Predicted GO |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
| BP | GO:0032886 | regulation of microtubule-based process | IEP | Predicted GO |
| MF | GO:0033925 | mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity | IEP | Predicted GO |
| BP | GO:0034472 | snRNA 3'-end processing | IEP | Predicted GO |
| BP | GO:0034477 | U6 snRNA 3'-end processing | IEP | Predicted GO |
| CC | GO:0036038 | MKS complex | IEP | Predicted GO |
| MF | GO:0043531 | ADP binding | IEP | Predicted GO |
| BP | GO:0043628 | ncRNA 3'-end processing | IEP | Predicted GO |
| CC | GO:0044441 | ciliary part | IEP | Predicted GO |
| CC | GO:0044445 | cytosolic part | IEP | Predicted GO |
| CC | GO:0044463 | cell projection part | IEP | Predicted GO |
| BP | GO:0044782 | cilium organization | IEP | Predicted GO |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Predicted GO |
| BP | GO:0046605 | regulation of centrosome cycle | IEP | Predicted GO |
| BP | GO:0046606 | negative regulation of centrosome cycle | IEP | Predicted GO |
| BP | GO:0048519 | negative regulation of biological process | IEP | Predicted GO |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Predicted GO |
| BP | GO:0051129 | negative regulation of cellular component organization | IEP | Predicted GO |
| BP | GO:0051493 | regulation of cytoskeleton organization | IEP | Predicted GO |
| BP | GO:0051494 | negative regulation of cytoskeleton organization | IEP | Predicted GO |
| BP | GO:0060271 | cilium assembly | IEP | Predicted GO |
| BP | GO:0070507 | regulation of microtubule cytoskeleton organization | IEP | Predicted GO |
| BP | GO:0070925 | organelle assembly | IEP | Predicted GO |
| BP | GO:0120031 | plasma membrane bounded cell projection assembly | IEP | Predicted GO |
| BP | GO:0120036 | plasma membrane bounded cell projection organization | IEP | Predicted GO |
| CC | GO:0120038 | plasma membrane bounded cell projection part | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |