1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g074200

Solyc06g074200


Description : photosystem I subunit O (AHRD V3.3 *** AT1G08380.1)


Gene families : OG_42_0005866 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005866_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g074200
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
A4A49_03553 No alias photosystem i subunit o 0.11 Orthogroups_2024-Update
A4A49_57000 No alias photosystem i subunit o 0.09 Orthogroups_2024-Update
At1g08380 No alias PSAO [Source:UniProtKB/TrEMBL;Acc:A0A178W5Y5] 0.07 Orthogroups_2024-Update
Bradi5g09530 No alias photosystem I subunit O 0.03 Orthogroups_2024-Update
Brara.F00523.1 No alias component *(PsaO) of PS-I complex 0.12 Orthogroups_2024-Update
Brara.I05310.1 No alias component *(PsaO) of PS-I complex 0.12 Orthogroups_2024-Update
Cre07.g334550 No alias photosystem I subunit O 0.08 Orthogroups_2024-Update
Glyma.11G181100 No alias photosystem I subunit O 0.08 Orthogroups_2024-Update
Glyma.12G092000 No alias photosystem I subunit O 0.03 Orthogroups_2024-Update
HORVU2Hr1G073370.3 No alias component *(PsaO) of PS-I complex 0.05 Orthogroups_2024-Update
Kfl00283_0090 kfl00283_0090_v1.1 (at1g08380 : 131.0) Encodes subunit O of photosystem I.;... 0.1 Orthogroups_2024-Update
LOC_Os04g33830 No alias membrane protein, putative, expressed 0.07 Orthogroups_2024-Update
Mp8g01210.1 No alias component PsaO of PS-I complex 0.06 Orthogroups_2024-Update
Potri.009G160800 No alias photosystem I subunit O 0.03 Orthogroups_2024-Update
Pp1s248_60V6 No alias 16kda membrane protein 0.13 Orthogroups_2024-Update
Pp1s248_61V6 No alias 16kda membrane protein 0.09 Orthogroups_2024-Update
Seita.7G092700.1 No alias component *(PsaO) of PS-I complex 0.1 Orthogroups_2024-Update
Sobic.006G073500.1 No alias component *(PsaO) of PS-I complex 0.12 Orthogroups_2024-Update
Sopen06g030620 No alias hypothetical protein 0.2 Orthogroups_2024-Update
evm.model.contig_3695.1 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!