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  5. Solyc01g073840

Solyc01g073840


Description : LOW QUALITY:Cysteine/Histidine-rich C1 domain family protein (AHRD V3.3 *** AT2G44380.1)


Gene families : OG_42_0001343 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g073840
Cluster HCCA clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
At4g09690 No alias Cysteine/Histidine-rich C1 domain family protein... 0.03 Orthogroups_2024-Update
Solyc01g073810 No alias LOW QUALITY:Cysteine/Histidine-rich C1 domain family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
CC GO:0005758 mitochondrial intermembrane space IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016530 metallochaperone activity IEP Predicted GO
MF GO:0016531 copper chaperone activity IEP Predicted GO
CC GO:0031970 organelle envelope lumen IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004146 DC1 69 116
IPR004146 DC1 283 330
IPR004146 DC1 128 180
IPR004146 DC1 225 272
IPR004146 DC1 14 58
No external refs found!