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  5. Kfl00360_0020

Kfl00360_0020 (kfl00360_0020_v1.1)


Aliases : kfl00360_0020_v1.1

Description : (at3g07110 : 303.0) Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, nucleolus, large ribosomal subunit, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822), Ribosomal protein L13, eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT5G48760.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o49885|rl13a_luplu : 289.0) 60S ribosomal protein L13a - Lupinus luteus (European yellow lupin) & (reliability: 606.0) & (original description: no original description)


Gene families : OG_42_0002020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00360_0020
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
166650 No alias Ribosomal protein L13 family protein 0.04 Orthogroups_2024-Update
A4A49_55645 No alias 60s ribosomal protein l13a-4 0.1 Orthogroups_2024-Update
At4g13170 No alias 60S ribosomal protein L13a-3... 0.07 Orthogroups_2024-Update
Bradi1g08260 No alias Ribosomal protein L13 family protein 0.04 Orthogroups_2024-Update
Brara.B03455.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.C03976.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.F02982.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.G00660.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.I00372.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Brara.I01172.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Cre12.g532550 No alias Ribosomal protein L13 family protein 0.08 Orthogroups_2024-Update
Glyma.08G353900 No alias Ribosomal protein L13 family protein 0.04 Orthogroups_2024-Update
Glyma.08G354000 No alias Ribosomal protein L13 family protein 0.06 Orthogroups_2024-Update
Glyma.09G024000 No alias Ribosomal protein L13 family protein 0.11 Orthogroups_2024-Update
HORVU2Hr1G063880.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
HORVU5Hr1G096060.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
MA_186340g0010 No alias (at3g24830 : 331.0) Ribosomal protein L13 family... 0.04 Orthogroups_2024-Update
Mp2g08690.1 No alias component RPL13a of LSU proteome component 0.03 Orthogroups_2024-Update
Mp4g15790.1 No alias component RPL13a of LSU proteome component 0.03 Orthogroups_2024-Update
PSME_00002229-RA No alias (at3g24830 : 323.0) Ribosomal protein L13 family... 0.05 Orthogroups_2024-Update
Potri.002G242600 No alias Ribosomal protein L13 family protein 0.04 Orthogroups_2024-Update
Pp1s165_40V6 No alias 60s ribosomal protein 0.09 Orthogroups_2024-Update
Pp1s174_48V6 No alias 60s ribosomal protein 0.11 Orthogroups_2024-Update
Pp1s63_162V6 No alias 60s ribosomal protein 0.1 Orthogroups_2024-Update
Pp1s75_223V6 No alias 60s ribosomal protein 0.04 Orthogroups_2024-Update
Pp1s80_110V6 No alias 60s ribosomal protein 0.1 Orthogroups_2024-Update
Seita.9G087700.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Sobic.001G085400.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Sobic.009G022400.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Solyc05g053670 No alias 60S ribosomal protein L13a-like protein (AHRD V3.3 ***... 0.06 Orthogroups_2024-Update
Solyc09g091740 No alias 60S ribosomal protein L13a-like protein (AHRD V3.3 ***... 0.1 Orthogroups_2024-Update
Solyc12g098330 No alias 60S ribosomal protein L13a-like protein (AHRD V3.3 ***... 0.07 Orthogroups_2024-Update
Sopen05g032170 No alias Ribosomal protein L13 0.12 Orthogroups_2024-Update
Sopen09g034630 No alias Ribosomal protein L13 0.11 Orthogroups_2024-Update
Sopen12g033110 No alias Ribosomal protein L13 0.09 Orthogroups_2024-Update
evm.model.contig_3478.11 No alias (at3g24830 : 235.0) Ribosomal protein L13 family... 0.07 Orthogroups_2024-Update
evm.model.tig00000792.29 No alias (at3g24830 : 242.0) Ribosomal protein L13 family... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEP Predicted GO
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 12 118
No external refs found!