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  5. Solyc06g074360

Solyc06g074360


Description : TRANSPARENT TESTA 1 protein, putative (AHRD V3.3 *** B9SCR9_RICCO)


Gene families : OG_42_0000614 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000614_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g074360
Cluster HCCA clusters: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
At1g13290 No alias Zinc finger protein WIP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX68] 0.02 Orthogroups_2024-Update
Bradi2g23870 No alias WIP domain protein 3 0.03 Orthogroups_2024-Update
Brara.E02114.1 No alias C2H2 subclass WIP transcription factor 0.03 Orthogroups_2024-Update
Glyma.12G237800 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
LOC_Os05g37190 No alias ZOS5-08 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g40960 No alias ZOS6-05 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
Pp1s203_59V6 No alias transparent testa 1 0.03 Orthogroups_2024-Update
Seita.2G162600.1 No alias C2H2 subclass WIP transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G363200.1 No alias C2H2 subclass WIP transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!