Kfl00376_0010 (kfl00376_0010_v1.1,...)

Aliases : kfl00376_0010_v1.1, kfl00376_0010_v1.1, kfl00376_0010_v1.1, kfl00376_0010_v1.1

Description : (at2g28830 : 87.8) PLANT U-BOX 12 (PUB12); FUNCTIONS IN: ubiquitin-protein ligase activity, structural constituent of ribosome, rRNA binding, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex, ribosome, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Ribosomal protein L10e/L16 (InterPro:IPR016180), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: plant U-box 13 (TAIR:AT3G46510.1); Has 16927 Blast hits to 15027 proteins in 4135 species: Archae - 0; Bacteria - 5491; Metazoa - 1535; Fungi - 908; Plants - 5936; Viruses - 3; Other Eukaryotes - 3054 (source: NCBI BLink). & (q64ha9|spl11_orysa : 85.9) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 175.6) & (original description: no original description)

Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Klebsormidium release: Kfl00376_0010
Cluster	HCCA clusters: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
416356	No alias	plant U-box 24	0.02	Orthogroups_2024-Update
426053	No alias	plant U-box 24	0.02	Orthogroups_2024-Update
A4A49_22370	No alias	u-box domain-containing protein 26	0.03	Orthogroups_2024-Update
A4A49_33780	No alias	e3 ubiquitin-protein ligase pub23	0.02	Orthogroups_2024-Update
A4A49_38562	No alias	u-box domain-containing protein 27	0.02	Orthogroups_2024-Update
GRMZM5G855994	No alias	ARM repeat superfamily protein	0.02	Orthogroups_2024-Update
Glyma.08G000400	No alias	plant U-box 25	0.02	Orthogroups_2024-Update
HORVU6Hr1G089560.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
LOC_Os02g33590	No alias	U-box domain-containing protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g35680	No alias	U-box domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_6335g0010	No alias	"(at5g64660 : 281.0) ""CYS, MET, PRO, and GLY protein...	0.03	Orthogroups_2024-Update
PSME_00043995-RA	No alias	(at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS...	0.02	Orthogroups_2024-Update
PSME_00056761-RA	No alias	(at3g19380 : 247.0) plant U-box 25 (PUB25); FUNCTIONS...	0.02	Orthogroups_2024-Update
Potri.006G202600	No alias	plant U-box 22	0.03	Orthogroups_2024-Update
Pp1s201_29V6	No alias	F14J22.1; U-box domain-containing protein [Arabidopsis thaliana]	0.02	Orthogroups_2024-Update
Seita.5G392700.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Seita.9G474100.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Sobic.001G441100.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Sobic.003G367000.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Sobic.006G086400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc11g068920	No alias	U-box domain-containing family protein (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Sopen01g002990	No alias	U-box domain	0.02	Orthogroups_2024-Update
Sopen04g026970	No alias	U-box domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Predicted GO
MF	GO:0008173	RNA methyltransferase activity	IEP	Predicted GO
MF	GO:0008483	transaminase activity	IEP	Predicted GO
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015696	ammonium transport	IEP	Predicted GO
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Predicted GO
MF	GO:0019842	vitamin binding	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	621	685

External Links

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Kfl00376_0010 (kfl00376_0010_v1.1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation