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  5. Solyc06g075600

Solyc06g075600


Description : Ankyrin repeat family protein (AHRD V3.3 *** AT1G07710.2)


Gene families : OG_42_0000679 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000679_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g075600
Cluster HCCA clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
At5g60070 No alias Ankyrin repeat family protein... 0.03 Orthogroups_2024-Update
Bradi3g41880 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
Bradi4g35460 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
Brara.E02855.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G042107 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
GRMZM2G123977 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
GRMZM2G338333 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
Potri.006G214500 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
Potri.007G099500 No alias ankyrin-like1 0.03 Orthogroups_2024-Update
Potri.007G099600 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
Potri.008G048400 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
Potri.016G080700 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
Seita.5G373200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G233100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G348400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc10g084550 No alias YELLOW STRIPE like 3 (AHRD V3.3 --* AT5G53550.6) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 87 151
IPR020683 Ankyrin_rpt-contain_dom 159 219
IPR026961 PGG_dom 342 458
No external refs found!