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  5. Kfl00475_0040

Kfl00475_0040 (kfl00475_0040_v1.1)


Aliases : kfl00475_0040_v1.1

Description : (q9xer8|rab7_goshi : 342.0) Ras-related protein Rab7 - Gossypium hirsutum (Upland cotton) & (at1g52280 : 337.0) RAB GTPase homolog G3D (RABG3d); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3C (TAIR:AT3G16100.1); Has 26220 Blast hits to 26194 proteins in 779 species: Archae - 32; Bacteria - 221; Metazoa - 13502; Fungi - 3923; Plants - 2848; Viruses - 20; Other Eukaryotes - 5674 (source: NCBI BLink). & (reliability: 674.0) & (original description: no original description)


Gene families : OG_42_0001031 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001031_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Klebsormidium release: Kfl00475_0040
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
At3g18820 No alias Ras-related protein RABG3f... 0.01 Orthogroups_2024-Update
GRMZM5G811797 No alias RAB GTPase homolog G3F 0.01 Orthogroups_2024-Update
HORVU3Hr1G071820.1 No alias G-class RAB GTPase 0.02 Orthogroups_2024-Update
MA_18050g0020 No alias (q9xer8|rab7_goshi : 341.0) Ras-related protein Rab7 -... 0.01 Orthogroups_2024-Update
Solyc04g072060 No alias Rab family GTPase (AHRD V3.3 *** D8RRT7_SELML) 0.02 Orthogroups_2024-Update
Sopen03g039570 No alias Ras family 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 177
No external refs found!