1. Home
  2. Species
  3. Klebsormidium nitens
  4. Sequence
  5. Kfl00502_0050

Kfl00502_0050 (kfl00502_0050_v1.1)


Aliases : kfl00502_0050_v1.1

Description : (at4g34830 : 391.0) Encodes MRL1, a conserved pentatricopeptide repeat protein, required for stabilization of rbcL mRNA.; MATURATION OF RBCL 1 (MRL1); INVOLVED IN: mRNA stabilization; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: genomes uncoupled 1 (TAIR:AT2G31400.1); Has 45662 Blast hits to 13867 proteins in 283 species: Archae - 3; Bacteria - 43; Metazoa - 608; Fungi - 635; Plants - 42548; Viruses - 0; Other Eukaryotes - 1825 (source: NCBI BLink). & (q76c99|rf1_orysa : 157.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 782.0) & (original description: no original description)


Gene families : OG_42_0005592 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005592_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00502_0050
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Bradi3g22720 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Pp1s67_98V6 No alias pentatricopeptide repeat-containing 0.02 Orthogroups_2024-Update
Seita.9G283200.1 No alias rbcL-mRNA stability factor *(MRL1) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR033443 PPR_long 785 897
IPR002885 Pentatricopeptide_repeat 746 771
IPR002885 Pentatricopeptide_repeat 917 965
IPR002885 Pentatricopeptide_repeat 672 720
No external refs found!