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  5. Kfl00557_g9

Kfl00557_g9 (kfl00557_g9_v1.1)


Aliases : kfl00557_g9_v1.1

Description : (at1g12560 : 146.0) Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Containing a conserved root hair-specific cis-element RHE. Expressed specifically in root hair cell.; expansin A7 (EXPA7); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: sperm cell, root hair, root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A18 (TAIR:AT1G62980.1); Has 2192 Blast hits to 2189 proteins in 166 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 53; Plants - 2083; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (q8w2x8|exp30_orysa : 135.0) Putative expansin-A30 precursor (OsEXPA30) (Alpha-expansin-30) (OsEXP30) (OsaEXPa1.32) - Oryza sativa (Rice) & (reliability: 292.0) & (original description: no original description)


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00557_g9
Cluster HCCA clusters: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
143857 No alias expansin A4 0.01 Orthogroups_2024-Update
AC234190.1_FG001 No alias expansin A17 0.03 Orthogroups_2024-Update
At2g39700 No alias Expansin-A4 [Source:UniProtKB/Swiss-Prot;Acc:O48818] 0.02 Orthogroups_2024-Update
Bradi2g53580 No alias expansin A8 0.03 Orthogroups_2024-Update
Glyma.11G219400 No alias Barwin-like endoglucanases superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G057100 No alias expansin A4 0.02 Orthogroups_2024-Update
Pp1s178_63V6 No alias alpha-expansin 1 0.04 Orthogroups_2024-Update
Seita.5G363100.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Sobic.003G338801.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sopen10g034230 No alias Pollen allergen 0.03 Orthogroups_2024-Update
Sopen10g035900 No alias Pollen allergen 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 166 243
IPR009009 RlpA-like_DPBB 79 153
No external refs found!