Solyc06g076740

Description : AT-rich interactive domain protein (AHRD V3.3 *-* Q2HUC6_MEDTR)

Gene families : OG_42_0002259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002259_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc06g076740
Cluster	HCCA clusters: Cluster_223

Target	Alias	Description	ECC score	Gene Family Method
Glyma.07G145600	No alias	DNA GYRASE B3	0.03	Orthogroups_2024-Update
Glyma.09G257700	No alias	ARID/BRIGHT DNA-binding domain;ELM2 domain protein	0.02	Orthogroups_2024-Update
Solyc08g081290	No alias	ARID/BRIGHT DNA-binding domain-containing protein (AHRD...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predicted GO
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predicted GO
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Predicted GO
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Predicted GO
CC	GO:0005681	spliceosomal complex	IEP	Predicted GO
CC	GO:0005875	microtubule associated complex	IEP	Predicted GO
BP	GO:0008380	RNA splicing	IEP	Predicted GO
MF	GO:0017048	Rho GTPase binding	IEP	Predicted GO
CC	GO:0030286	dynein complex	IEP	Predicted GO
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Predicted GO
MF	GO:0035091	phosphatidylinositol binding	IEP	Predicted GO
MF	GO:0045735	nutrient reservoir activity	IEP	Predicted GO
MF	GO:1901681	sulfur compound binding	IEP	Predicted GO

No InterPro domains available for this sequence

External Links

No external refs found!