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  5. Solyc06g082070

Solyc06g082070


Description : Trichome birefringence-like protein (AHRD V3.3 *** G7IKB9_MEDTR)


Gene families : OG_42_0005156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g082070
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
A4A49_39298 No alias protein pmr5 0.03 Orthogroups_2024-Update
At5g58600 No alias Protein PMR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUZ6] 0.03 Orthogroups_2024-Update
Glyma.11G171300 No alias Plant protein of unknown function (DUF828) 0.03 Orthogroups_2024-Update
Sopen06g033460 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR026057 PC-Esterase 111 389
IPR025846 PMR5_N_dom 58 110
No external refs found!