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  5. Solyc06g082130

Solyc06g082130


Description : Pyruvate decarboxylase (AHRD V3.3 *** A0A068LJB0_HEVBR)


Gene families : OG_42_0000963 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000963_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g082130
Cluster HCCA clusters: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AC197705.4_FG001 No alias Thiamine pyrophosphate dependent pyruvate decarboxylase... 0.03 Orthogroups_2024-Update
MA_12415g0010 No alias (p51851|pdc2_pea : 593.0) Pyruvate decarboxylase isozyme... 0.04 Orthogroups_2024-Update
Seita.5G113700.1 No alias pyruvate decarboxylase *(PDC) & EC_4.1 carbon-carbon lyase 0.02 Orthogroups_2024-Update
Sobic.001G405500.1 No alias pyruvate decarboxylase *(PDC) & EC_4.1 carbon-carbon lyase 0.03 Orthogroups_2024-Update
Sobic.009G169000.1 No alias pyruvate decarboxylase *(PDC) & EC_4.1 carbon-carbon lyase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0030976 thiamine pyrophosphate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 25 196
IPR011766 TPP_enzyme-bd_C 455 582
IPR012000 Thiamin_PyroP_enz_cen_dom 222 334
No external refs found!