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  5. Solyc06g082310

Solyc06g082310


Description : LOB domain-containing protein, putative (AHRD V3.3 *** B9S461_RICCO)


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g082310
Cluster HCCA clusters: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
At2g40470 No alias LOB domain-containing protein 15... 0.03 Orthogroups_2024-Update
GRMZM2G145568 No alias LOB domain-containing protein 11 0.02 Orthogroups_2024-Update
Glyma.13G349700 No alias LOB domain-containing protein 22 0.03 Orthogroups_2024-Update
Glyma.19G004900 No alias LOB domain-containing protein 25 0.02 Orthogroups_2024-Update
Kfl00147_0060 kfl00147_0060_v1.1 (at1g65620 : 174.0) Required for formation of a... 0.01 Orthogroups_2024-Update
MA_61242g0010 No alias (at5g63090 : 153.0) Involved in lateral organ... 0.03 Orthogroups_2024-Update
MA_902082g0010 No alias (at1g07900 : 123.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
PSME_00009389-RA No alias (at2g28500 : 147.0) LOB domain-containing protein 11... 0.03 Orthogroups_2024-Update
PSME_00020323-RA No alias (at1g07900 : 152.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
PSME_00028054-RA No alias (at1g07900 : 124.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
Solyc01g044520 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc06g064540 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Sopen06g033700 No alias Protein of unknown function DUF260 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
CC GO:0009317 acetyl-CoA carboxylase complex IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 7 104
No external refs found!