Solyc01g079180

Description : Pectinesterase (AHRD V3.3 *** K4AXG4_SOLLC)

Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc01g079180
Cluster	HCCA clusters: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method
81583	No alias	Pectin lyase-like superfamily protein	0.02	Orthogroups_2024-Update
A4A49_28049	No alias	putative pectinesterase 8	0.02	Orthogroups_2024-Update
Bradi4g00840	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
MA_10428625g0010	No alias	(at3g29090 : 374.0) Encodes an atypical pectin...	0.04	Orthogroups_2024-Update
PSME_00007923-RA	No alias	(at5g19730 : 228.0) Pectin lyase-like superfamily...	0.03	Orthogroups_2024-Update
PSME_00020051-RA	No alias	(at5g19730 : 262.0) Pectin lyase-like superfamily...	0.02	Orthogroups_2024-Update
PSME_00045931-RA	No alias	(at5g47500 : 448.0) Pectin lyase-like superfamily...	0.03	Orthogroups_2024-Update
Pp1s198_26V6	No alias	pectin methylesterase	0.02	Orthogroups_2024-Update
Pp1s215_36V6	No alias	pectin methylesterase	0.02	Orthogroups_2024-Update
Pp1s55_167V6	No alias	pectin methylesterase	0.02	Orthogroups_2024-Update
Seita.9G259700.1	No alias	pectin methylesterase	0.03	Orthogroups_2024-Update
Sobic.001G252300.1	No alias	pectin methylesterase	0.03	Orthogroups_2024-Update
Sobic.002G138400.1	No alias	pectin methylesterase	0.02	Orthogroups_2024-Update
Solyc09g091730	No alias	Pectinesterase (AHRD V3.3 *** K4CWJ9_SOLLC)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	InterProScan predictions
BP	GO:0042545	cell wall modification	IEA	InterProScan predictions
CC	GO:0044464	cell part	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	89	380

External Links

No external refs found!