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  5. Solyc06g083000

Solyc06g083000


Description : Calcium-binding protein (AHRD V3.3 *** Q9SCA1_LOTJA)


Gene families : OG_42_0000821 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g083000
Cluster HCCA clusters: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
96597 No alias ARF-GAP domain 11 0.02 Orthogroups_2024-Update
At4g12860 No alias UNE14 [Source:UniProtKB/TrEMBL;Acc:A0A178UUX0] 0.03 Orthogroups_2024-Update
MA_10431273g0010 No alias (at3g07490 : 112.0) A member of ARF GAP domain (AGD), A... 0.02 Orthogroups_2024-Update
MA_393053g0010 No alias (at3g07490 : 116.0) A member of ARF GAP domain (AGD), A... 0.03 Orthogroups_2024-Update
Potri.002G077300 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Potri.018G127100 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 76 142
IPR002048 EF_hand_dom 6 67
No external refs found!