Aliases : kfl00725_0040_v1.1
Description : (at1g05055 : 401.0) Member of transcription factor TFIIH complex. Involved in transcription and DNA repair and interacts with AtXPD.; general transcription factor II H2 (GTF2H2); CONTAINS InterPro DOMAIN/s: Ssl1-like (InterPro:IPR007198), TFIIH basal transcription factor complex, subunit SSL1 (InterPro:IPR012170), Zinc finger, RING-type (InterPro:IPR001841), TFIIH C1-like, C-terminal (InterPro:IPR004595), von Willebrand factor, type A (InterPro:IPR002035); Has 470 Blast hits to 463 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 160; Plants - 39; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 802.0) & (original description: no original description)
Gene families : OG_42_0007412 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007412_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Klebsormidium release: Kfl00725_0040 | |
Cluster | HCCA clusters: Cluster_40 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi5g15270 | No alias | general transcription factor II H2 | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006281 | DNA repair | IEA | InterProScan predictions |
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | Predicted GO |
MF | GO:0003688 | DNA replication origin binding | IEP | Predicted GO |
MF | GO:0004594 | pantothenate kinase activity | IEP | Predicted GO |
MF | GO:0004619 | phosphoglycerate mutase activity | IEP | Predicted GO |
MF | GO:0004649 | poly(ADP-ribose) glycohydrolase activity | IEP | Predicted GO |
BP | GO:0006887 | exocytosis | IEP | Predicted GO |
BP | GO:0007062 | sister chromatid cohesion | IEP | Predicted GO |
BP | GO:0007064 | mitotic sister chromatid cohesion | IEP | Predicted GO |
BP | GO:0007275 | multicellular organism development | IEP | Predicted GO |
MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Predicted GO |
CC | GO:0009507 | chloroplast | IEP | Predicted GO |
CC | GO:0009536 | plastid | IEP | Predicted GO |
BP | GO:0015936 | coenzyme A metabolic process | IEP | Predicted GO |
BP | GO:0015937 | coenzyme A biosynthetic process | IEP | Predicted GO |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Predicted GO |
BP | GO:0022402 | cell cycle process | IEP | Predicted GO |
BP | GO:0032501 | multicellular organismal process | IEP | Predicted GO |
BP | GO:0032502 | developmental process | IEP | Predicted GO |
BP | GO:0032940 | secretion by cell | IEP | Predicted GO |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0033866 | nucleoside bisphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0034030 | ribonucleoside bisphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0034033 | purine nucleoside bisphosphate biosynthetic process | IEP | Predicted GO |
MF | GO:0043015 | gamma-tubulin binding | IEP | Predicted GO |
CC | GO:0044448 | cell cortex part | IEP | Predicted GO |
MF | GO:0046422 | violaxanthin de-epoxidase activity | IEP | Predicted GO |
MF | GO:0046537 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity | IEP | Predicted GO |
BP | GO:0046903 | secretion | IEP | Predicted GO |
BP | GO:0048856 | anatomical structure development | IEP | Predicted GO |
CC | GO:0099023 | tethering complex | IEP | Predicted GO |
BP | GO:1903047 | mitotic cell cycle process | IEP | Predicted GO |
MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | Predicted GO |
No external refs found! |