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  5. Solyc06g083270

Solyc06g083270


Description : ER lumen retaining receptor family-like protein (AHRD V3.3 *** Q38JH5_SOLTU)


Gene families : OG_42_0001581 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001581_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g083270
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Kfl00062_0230 kfl00062_0230_v1.1 (at4g38790 : 370.0) ER lumen protein retaining receptor... 0.02 Orthogroups_2024-Update
PSME_00025392-RA No alias (at2g21190 : 425.0) ER lumen protein retaining receptor... 0.02 Orthogroups_2024-Update
Sopen06g034650 No alias ER lumen protein retaining receptor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006621 protein retention in ER lumen IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0046923 ER retention sequence binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000175 3'-5'-exoribonuclease activity IEP Predicted GO
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening IEP Predicted GO
CC GO:0000922 spindle pole IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004532 exoribonuclease activity IEP Predicted GO
MF GO:0004535 poly(A)-specific ribonuclease activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005815 microtubule organizing center IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0007020 microtubule nucleation IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000133 ER_ret_rcpt 74 216
No external refs found!