Aliases : kfl00807_0010_v1.1
Description : (at4g25550 : 303.0) Cleavage/polyadenylation specificity factor, 25kDa subunit; CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, 25kDa subunit (InterPro:IPR016706); BEST Arabidopsis thaliana protein match is: homolog of CFIM-25 (TAIR:AT4G29820.1); Has 397 Blast hits to 397 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 171; Fungi - 88; Plants - 70; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (reliability: 606.0) & (original description: no original description)
Gene families : OG_42_0002246 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002246_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Klebsormidium release: Kfl00807_0010 | |
Cluster | HCCA clusters: Cluster_20 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Sobic.006G272200.1 | No alias | component *(CPFS5/CFIm25) of Cleavage Factor I (CF-Im) complex | 0.01 | Orthogroups_2024-Update | |
Solyc03g025880 | No alias | Cleavage and polyadenylation specificity factor subunit... | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003729 | mRNA binding | IEA | InterProScan predictions |
CC | GO:0005849 | mRNA cleavage factor complex | IEA | InterProScan predictions |
BP | GO:0006378 | mRNA polyadenylation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR016706 | Cleav_polyA_spec_factor_su5 | 6 | 193 |
No external refs found! |