Aliases : kfl00810_0020_v1.1
Description : (at1g67500 : 880.0) Encodes the catalytic subunit of DNA polymerase zeta.Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).; recovery protein 3 (REV3); CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (TAIR:AT5G63960.1). & (o48901|dpod1_soybn : 244.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Glycine max (Soybean) & (reliability: 1760.0) & (original description: no original description)
Gene families : OG_42_0001655 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001655_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Klebsormidium release: Kfl00810_0020 | |
Cluster | HCCA clusters: Cluster_37 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
155333 | No alias | DNA binding;nucleotide binding;nucleic acid... | 0.04 | Orthogroups_2024-Update | |
413713 | No alias | recovery protein 3 | 0.04 | Orthogroups_2024-Update | |
A4A49_19740 | No alias | dna polymerase delta catalytic subunit | 0.02 | Orthogroups_2024-Update | |
GRMZM2G081639 | No alias | recovery protein 3 | 0.02 | Orthogroups_2024-Update | |
Pp1s265_31V6 | No alias | dna polymerase zeta catalytic | 0.02 | Orthogroups_2024-Update | |
Sobic.002G409700.2 | No alias | catalytic component *(REV3) of DNA polymerase zeta complex | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEA | InterProScan predictions |
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001871 | pattern binding | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
MF | GO:0005543 | phospholipid binding | IEP | Predicted GO |
CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
BP | GO:0006650 | glycerophospholipid metabolic process | IEP | Predicted GO |
BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
MF | GO:0008289 | lipid binding | IEP | Predicted GO |
MF | GO:0016301 | kinase activity | IEP | Predicted GO |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
MF | GO:0016740 | transferase activity | IEP | Predicted GO |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
MF | GO:0030246 | carbohydrate binding | IEP | Predicted GO |
MF | GO:0030247 | polysaccharide binding | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032947 | protein-containing complex scaffold activity | IEP | Predicted GO |
MF | GO:0035091 | phosphatidylinositol binding | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0043167 | ion binding | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
BP | GO:0043248 | proteasome assembly | IEP | Predicted GO |
BP | GO:0046486 | glycerolipid metabolic process | IEP | Predicted GO |
BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Predicted GO |
BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
MF | GO:2001070 | starch binding | IEP | Predicted GO |
No external refs found! |