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Aliases : kfl00864_0030_v1.1
Description : (at3g16080 : 136.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L37e, conserved site (InterPro:IPR018267), Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein L37ae/L37e, N-terminal domain (InterPro:IPR011331), Ribosomal protein L37e (InterPro:IPR001569); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT1G52300.1); Has 993 Blast hits to 993 proteins in 346 species: Archae - 294; Bacteria - 0; Metazoa - 303; Fungi - 142; Plants - 122; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (reliability: 272.0) & (original description: no original description)
Gene families : OG_42_0001791 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001791_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Klebsormidium release: Kfl00864_0030 | |
| Cluster | HCCA clusters: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g52300 | No alias | 60S ribosomal protein L37-2... | 0.05 | Orthogroups_2024-Update | |
| Bradi3g01190 | No alias | Zinc-binding ribosomal protein family protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g55170 | No alias | Zinc-binding ribosomal protein family protein | 0.02 | Orthogroups_2024-Update | |
| Brara.C03600.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
| Brara.E01589.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
| Brara.E02541.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
| Brara.F00200.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
| Brara.H00172.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
| Cre10.g430400 | No alias | Zinc-binding ribosomal protein family protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G168674 | No alias | Zinc-binding ribosomal protein family protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.08G205500 | No alias | Zinc-binding ribosomal protein family protein | 0.04 | Orthogroups_2024-Update | |
| HORVU0Hr1G003770.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G005390.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
| HORVU6Hr1G090070.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
| LOC_Os02g56990 | No alias | ribosomal protein L37, putative, expressed | 0.01 | Orthogroups_2024-Update | |
| Mp2g12400.1 | No alias | component RPL37 of LSU proteome component | 0.03 | Orthogroups_2024-Update | |
| PSME_00050791-RA | No alias | (at3g16080 : 155.0) Zinc-binding ribosomal protein... | 0.03 | Orthogroups_2024-Update | |
| Potri.006G243300 | No alias | Zinc-binding ribosomal protein family protein | 0.04 | Orthogroups_2024-Update | |
| Potri.018G036900 | No alias | Zinc-binding ribosomal protein family protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s152_133V6 | No alias | 60s ribosomal protein l37 | 0.03 | Orthogroups_2024-Update | |
| Pp1s222_87V6 | No alias | 60s ribosomal protein l37 | 0.04 | Orthogroups_2024-Update | |
| Pp1s3_512V6 | No alias | 60s ribosomal protein l37 | 0.04 | Orthogroups_2024-Update | |
| Pp1s475_18V6 | No alias | 60s ribosomal protein l37 | 0.04 | Orthogroups_2024-Update | |
| Seita.1G363500.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
| Sobic.001G347901.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
| Sobic.004G008400.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
| Solyc03g120780 | No alias | Ribosomal protein L37 (AHRD V3.3 *** K4BMM7_SOLLC) | 0.04 | Orthogroups_2024-Update | |
| Sopen03g039600 | No alias | Ribosomal protein L37e | 0.05 | Orthogroups_2024-Update | |
| Sopen06g024930 | No alias | Ribosomal protein L37e | 0.06 | Orthogroups_2024-Update | |
| evm.model.tig00020610.80 | No alias | (at1g52300 : 115.0) Zinc-binding ribosomal protein... | 0.05 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
| CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
| CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
| BP | GO:0006412 | translation | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003993 | acid phosphatase activity | IEP | Predicted GO |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Predicted GO |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001569 | Ribosomal_L37e | 6 | 56 |
| No external refs found! |