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  5. Solyc06g083930

Solyc06g083930


Description : LOB domain-containing protein, putative (AHRD V3.3 *** B9S4L6_RICCO)


Gene families : OG_42_0000426 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000426_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g083930
Cluster HCCA clusters: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AC149818.2_FG009 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
At5g06080 No alias LOB domain-containing protein 33... 0.03 Orthogroups_2024-Update
GRMZM2G092542 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 7 104
No external refs found!