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  5. Solyc06g084050

Solyc06g084050


Description : LOW QUALITY:isochorismate synthase 2 (AHRD V3.3 --* AT1G18870.2)


Gene families : OG_42_0003970 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g084050
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
A4A49_19163 No alias photosystem ii reaction center w protein, chloroplastic 0.05 Orthogroups_2024-Update
At2g30570 No alias PSBW [Source:UniProtKB/TrEMBL;Acc:A0A178VQ32] 0.03 Orthogroups_2024-Update
Bradi2g20380 No alias photosystem II reaction center W 0.06 Orthogroups_2024-Update
Brara.D01828.1 No alias component *(PsbW) of PS-II complex 0.07 Orthogroups_2024-Update
Brara.E01277.1 No alias component *(PsbW) of PS-II complex 0.05 Orthogroups_2024-Update
Glyma.02G141700 No alias photosystem II reaction center W 0.06 Orthogroups_2024-Update
Glyma.03G159100 No alias photosystem II reaction center W 0.04 Orthogroups_2024-Update
Glyma.10G032200 No alias photosystem II reaction center W 0.04 Orthogroups_2024-Update
Glyma.19G161400 No alias photosystem II reaction center W 0.04 Orthogroups_2024-Update
HORVU1Hr1G078140.4 No alias component *(PsbW) of PS-II complex 0.05 Orthogroups_2024-Update
LOC_Os01g56680 No alias photosystem II reaction center W protein, chloroplast... 0.03 Orthogroups_2024-Update
Mp5g14190.1 No alias component PsbW of PS-II complex 0.03 Orthogroups_2024-Update
Pp1s185_110V6 No alias photosystem ii reaction center w chloroplast 0.02 Orthogroups_2024-Update
Pp1s185_111V6 No alias photosystem ii reaction center w chloroplast 0.04 Orthogroups_2024-Update
Seita.3G184900.1 No alias component *(PsbW) of PS-II complex 0.06 Orthogroups_2024-Update
Seita.5G336700.1 No alias component *(PsbW) of PS-II complex 0.05 Orthogroups_2024-Update
Sobic.003G313000.1 No alias component *(PsbW) of PS-II complex 0.08 Orthogroups_2024-Update
Sobic.009G191300.1 No alias component *(PsbW) of PS-II complex 0.04 Orthogroups_2024-Update
Sopen06g035440 No alias Photosystem II reaction centre W protein (PsbW) 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!