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  5. Solyc07g005090

Solyc07g005090


Description : Chitinase, putative (AHRD V3.3 *** B9SC02_RICCO)


Gene families : OG_42_0001295 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001295_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g005090
Cluster HCCA clusters: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
110031 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.04 Orthogroups_2024-Update
At4g19730 No alias Glycosyl hydrolase family 18 protein... 0.03 Orthogroups_2024-Update
Brara.A01069.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
PSME_00004881-RA No alias (at4g19810 : 289.0) Glycosyl hydrolase family protein... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 31 355
No external refs found!