Solyc07g005140

Description : Two-component response regulator (AHRD V3.3 *** W9RL08_9ROSA)

Gene families : OG_42_0000401 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000401_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc07g005140
Cluster	HCCA clusters: Cluster_243

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g30805	No alias	response regulator 1	0.02	Orthogroups_2024-Update
Brara.K00386.1	No alias	subgroup ARR-B transcription factor & B-type ARR...	0.03	Orthogroups_2024-Update
GRMZM2G177220	No alias	response regulator 11	0.02	Orthogroups_2024-Update
Glyma.04G062500	No alias	response regulator 12	0.02	Orthogroups_2024-Update
Glyma.17G076000	No alias	response regulator 12	0.04	Orthogroups_2024-Update
Potri.006G262100	No alias	response regulator 12	0.03	Orthogroups_2024-Update
Sobic.001G451000.1	No alias	subgroup ARR-B transcription factor & B-type ARR...	0.02	Orthogroups_2024-Update
Sobic.003G393300.1	No alias	subgroup ARR-B transcription factor & B-type ARR...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	InterProScan predictions
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000347	THO complex	IEP	Predicted GO
CC	GO:0000445	THO complex part of transcription export complex	IEP	Predicted GO
MF	GO:0003993	acid phosphatase activity	IEP	Predicted GO
MF	GO:0005096	GTPase activator activity	IEP	Predicted GO
MF	GO:0008047	enzyme activator activity	IEP	Predicted GO
BP	GO:0051259	protein complex oligomerization	IEP	Predicted GO
BP	GO:0051260	protein homooligomerization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	28	137

External Links

No external refs found!