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  5. Solyc01g079470

Solyc01g079470


Description : CP12 (AHRD V3.3 *** O24136_TOBAC)


Gene families : OG_42_0002116 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g079470
Cluster HCCA clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
A4A49_18470 No alias calvin cycle protein cp12-2, chloroplastic 0.05 Orthogroups_2024-Update
LOC_Os01g19740 No alias calvin cycle protein CP12, putative, expressed 0.04 Orthogroups_2024-Update
Sopen01g031240 No alias CP12 domain 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR003823 DUF_CP12 55 123
No external refs found!