1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g006220

Solyc07g006220


Description : UDP-glucuronate 4-epimerase 4 (AHRD V3.3 *** GAE4_ARATH)


Gene families : OG_42_0000869 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000869_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g006220
Cluster HCCA clusters: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
89938 No alias UDP-D-glucuronate 4-epimerase 3 0.03 Orthogroups_2024-Update
A4A49_39751 No alias udp-glucuronate 4-epimerase 1 0.04 Orthogroups_2024-Update
MA_52380g0010 No alias (at1g02000 : 633.0) UDP-D-glucuronate 4-epimerase;... 0.03 Orthogroups_2024-Update
MA_52763g0010 No alias (at4g00110 : 598.0) Encodes a putative membrane-anchored... 0.04 Orthogroups_2024-Update
PSME_00000157-RA No alias (at1g02000 : 650.0) UDP-D-glucuronate 4-epimerase;... 0.03 Orthogroups_2024-Update
Pp1s38_222V6 No alias udp-glucuronate 5- 0.04 Orthogroups_2024-Update
Seita.1G347800.1 No alias UDP-D-glucuronic acid 4-epimerase 0.03 Orthogroups_2024-Update
Sopen07g002320 No alias NAD dependent epimerase/dehydratase family 0.03 Orthogroups_2024-Update
Sopen08g027810 No alias NAD dependent epimerase/dehydratase family 0.03 Orthogroups_2024-Update
Sopen12g033260 No alias NAD dependent epimerase/dehydratase family 0.04 Orthogroups_2024-Update
Sopen12g033320 No alias NAD dependent epimerase/dehydratase family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 90 409
No external refs found!