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  5. LOC_Os01g03490

LOC_Os01g03490


Description : heavy-metal-associated domain-containing protein, putative, expressed


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g03490
Cluster HCCA clusters: cluster_0139

Target Alias Description ECC score Gene Family Method Actions
At4g35060 No alias HIPP25 [Source:UniProtKB/TrEMBL;Acc:A0A178V323] 0.03 Orthogroups_2024-Update
Bradi1g62660 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g26615 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Brara.A00324.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B00150.1 No alias copper chaperone *(ATX/CCH) 0.02 Orthogroups_2024-Update
Brara.G03023.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I03270.1 No alias Unknown function 0.01 Orthogroups_2024-Update
GRMZM2G022318 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G036631 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G055999 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G257300 No alias Heavy metal transport/detoxification superfamily protein 0.05 Orthogroups_2024-Update
Glyma.10G112000 No alias copper chaperone 0.02 Orthogroups_2024-Update
Glyma.10G264100 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G126200 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G118340.7 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_138132g0020 No alias (at5g05365 : 81.6) Heavy metal transport/detoxification... 0.02 Orthogroups_2024-Update
MA_923474g0010 No alias (at4g39700 : 135.0) Heavy metal transport/detoxification... 0.02 Orthogroups_2024-Update
MA_927203g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_93348g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Mp2g12470.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
PSME_00018078-RA No alias (at4g39700 : 206.0) Heavy metal transport/detoxification... 0.02 Orthogroups_2024-Update
PSME_00029960-RA No alias (at4g39700 : 182.0) Heavy metal transport/detoxification... 0.02 Orthogroups_2024-Update
PSME_00034091-RA No alias (at4g39700 : 168.0) Heavy metal transport/detoxification... 0.02 Orthogroups_2024-Update
Potri.001G234700 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G087300 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G023800 No alias homolog of anti-oxidant 1 0.02 Orthogroups_2024-Update
Potri.009G135300 No alias farnesylated protein 6 0.03 Orthogroups_2024-Update
Potri.010G114300 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G182725 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Pp1s93_56V6 No alias heavy metal-associated domain containing expressed 0.02 Orthogroups_2024-Update
Seita.2G187200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G168600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G324300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G034900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G035800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G123200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g111600 No alias Heavy metal transport/detoxification superfamily protein... 0.02 Orthogroups_2024-Update
Solyc04g072700 No alias Heavy metal transport/detoxification superfamily protein... 0.03 Orthogroups_2024-Update
Sopen02g035920 No alias Heavy-metal-associated domain 0.02 Orthogroups_2024-Update
Sopen03g007490 No alias Heavy-metal-associated domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 16 68
No external refs found!