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  5. LOC_Os01g04070

LOC_Os01g04070


Description : verticillium wilt disease resistance protein, putative, expressed


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g04070
Cluster HCCA clusters: cluster_0133

Target Alias Description ECC score Gene Family Method Actions
Bradi5g14330 No alias receptor like protein 19 0.03 Orthogroups_2024-Update
Glyma.13G227800 No alias receptor like protein 33 0.03 Orthogroups_2024-Update
Glyma.14G106400 No alias receptor like protein 6 0.02 Orthogroups_2024-Update
LOC_Os01g06520 No alias verticillium wilt disease resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g06920 No alias resistance protein SlVe1 precursor, putative, expressed 0.03 Orthogroups_2024-Update
Potri.011G104600 No alias receptor like protein 19 0.02 Orthogroups_2024-Update
Potri.012G009200 No alias receptor like protein 33 0.02 Orthogroups_2024-Update
Seita.2G052800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.2G052900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G105700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G116300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G139100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g005710 No alias LOW QUALITY:Leucine-rich repeat receptor-like protein... 0.02 Orthogroups_2024-Update
Solyc01g008410 No alias LOW QUALITY:Leucine-rich repeat receptor-like protein... 0.02 Orthogroups_2024-Update
Solyc12g006020 No alias No description available 0.02 Orthogroups_2024-Update
Sopen01g001730 No alias Leucine Rich repeats (2 copies) 0.02 Orthogroups_2024-Update
Sopen06g003130 No alias Leucine Rich repeats (2 copies) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 36 76
IPR025875 Leu-rich_rpt_4 1084 1123
IPR001611 Leu-rich_rpt 894 951
IPR001611 Leu-rich_rpt 274 318
IPR001611 Leu-rich_rpt 623 683
No external refs found!