LOC_Os01g04220

Description : DNA binding protein, putative, expressed

Gene families : OG_42_0000408 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000408_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os01g04220
Cluster	HCCA clusters: cluster_0080

Target	Alias	Description	ECC score	Gene Family Method
HORVU1Hr1G085260.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.3G404300.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc05g009110	No alias	LOW QUALITY:Core-2/I-branching...	0.02	Orthogroups_2024-Update
Solyc05g009130	No alias	core-2/I-branching...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
MF	GO:0008375	acetylglucosaminyltransferase activity	IEA	InterProScan predictions
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	Predicted GO
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Predicted GO
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Predicted GO
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Predicted GO
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
MF	GO:0046983	protein dimerization activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003406	Glyco_trans_14	132	362

External Links

No external refs found!