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  5. LOC_Os01g04650

LOC_Os01g04650


Description : PB1 domain containing protein, expressed


Gene families : OG_42_0000314 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g04650
Cluster HCCA clusters: cluster_0116

Target Alias Description ECC score Gene Family Method Actions
Brara.A02944.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.06G178000 No alias Octicosapeptide/Phox/Bem1p family protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G075060.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_72603g0020 No alias (at5g09620 : 156.0) Octicosapeptide/Phox/Bem1p family... 0.02 Orthogroups_2024-Update
Potri.001G285800 No alias Octicosapeptide/Phox/Bem1p family protein 0.02 Orthogroups_2024-Update
Potri.004G095600 No alias Octicosapeptide/Phox/Bem1p family protein 0.03 Orthogroups_2024-Update
Potri.008G186500 No alias Octicosapeptide/Phox/Bem1p family protein 0.02 Orthogroups_2024-Update
Seita.5G096000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen00g013110 No alias PB1 domain 0.02 Orthogroups_2024-Update
Sopen02g031020 No alias PB1 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000270 PB1_dom 71 164
No external refs found!