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  5. LOC_Os01g04680

LOC_Os01g04680


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000058 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g04680
Cluster HCCA clusters: cluster_0117

Target Alias Description ECC score Gene Family Method Actions
Bradi1g12045 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi3g39495 No alias RNA-directed DNA polymerase (reverse... 0.02 Orthogroups_2024-Update
HORVU5Hr1G068700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G087610.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G223300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G150001.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR026960 RVT-Znf 243 327
No external refs found!